Publications
2024
Recovering high-quality bacterial genomes from cross-contaminated cultures: a case study of marine Vibrio campbellii
Orel, N., Fadeev, E., Herndl, G. J., Turk, V., & Tinta, T. (2024).
BMC Genomics 25, 146. https://doi.org/10.1186/s12864-024-10062-2
Bacterial degradation of ctenophore Mnemiopsis leidyi organic matter
Fadeev, E., Hennenfeind, J., Amano, C., Zhao, Z., Klun, K., Herndl, G. J., & Tinta T. (2024).
mSystems, e01264-23. https://doi.org/10.1128/msystems.01264-23
2023
Selecting 16S rRNA Primers for Microbiome Analysis in a Host–Microbe System: The Case of the Jellyfish Rhopilema nomadica
Barak, N., Fadeev, E., Brekhman, V., Aharonovich, D., Lotan, T., & Sher D. (2023).
Microorganisms 2023, 11(4), 955. https://doi.org/10.3390/microorganisms11040955
2022
Characterization of membrane vesicles in Alteromonas macleodii indicates potential roles in their copiotrophic lifestyle
Fadeev, E., Bastos, C. C., Hennenfeind, J., Biller, S. J., Sher, D. J., Wietz, M., & Herndl, G. J. (2022).
MicroLife, December, 2022. https://doi.org/10.1093/femsml/uqac025
Bacterial Indicators Are Ubiquitous Members of Pelagic Microbiome in Anthropogenically Impacted Coastal Ecosystem
Orel, N., Fadeev, E., Klun, K., Ličer , M., Tinta, T., & Turk, V. (2020).
Frontiers in Microbiology, 12. https://doi.org/10.3389/fmicb.2021.765091
2021
Sea ice presence is linked to higher carbon export and vertical microbial connectivity in the Eurasian Arctic Ocean
Fadeev, E., Rogge, A., Ramondenc, S., Nöthig, E.-M., Wekerle, C., Bienhold, C., Salter, I., Waite, A. M., Hehemann, L., Boetius, A., & Iversen, M. H. (2021).
Communications Biology, 4(1), 1–13. https://doi.org/10.1038/s42003-021-02776-w
Seasonal Dynamics Are the Major Driver of Microbial Diversity and Composition in Intensive Freshwater Aquaculture
Marmen, S. ‡ , Fadeev, E. ‡ , Al Ashhab, A., Benet-Perelberg, A., Naor, A., Patil, H. J., Cytryn, E., Viner-Mozzini, Y., Sukenik, A., Lalzar, M., & Sher, D. (2021). ( ‡ - equal contribution)
Frontiers in Microbiology, 12, 679743. https://doi.org/10.3389/fmicb.2021.679743
Submesoscale physicochemical dynamics directly shape bacterioplankton community structure in space and time
Fadeev, E., Wietz, M., von Appen, W.-J., Iversen, M. H., Nöthig, E.-M., Engel, A., Grosse, J., Graeve, M., & Boetius, A. (2021).
Limnology and Oceanography, 66(7), 2901–2913. https://doi.org/10.1002/lno.11799
Spatial Distribution of Arctic Bacterioplankton Abundance Is Linked to Distinct Water Masses and Summertime Phytoplankton Bloom Dynamics (Fram Strait, 79°N)
Cardozo-Mino, M. G. ‡ , Fadeev, E., Salman-Carvalho, V., & Boetius, A. (2021). ( ‡ - equal contribution)
Frontiers in Microbiology, 12, 658803. https://doi.org/10.3389/fmicb.2021.658803
Comparison of Two 16S rRNA Primers (V3-V4 and V4-V5) for Studies of Arctic Microbial Communities
Fadeev, E., Cardozo-Mino, M. G., Rapp, J. Z., Bienhold, C., Salter, I., Salman-Carvalho, V., Molari, M., Tegetmeyer, H. E., Buttigieg, P. L., & Boetius, A. (2021).
Frontiers in Microbiology, 12, 637526. https://doi.org/10.3389/fmicb.2021.637526
Functional Seasonality of Free-Living and Particle-Associated Prokaryotic Communities in the Coastal Adriatic Sea
Steiner, P. A., Geijo, J., Fadeev, E., Obiol, A., Sintes, E., Rattei, T., & Herndl, G. J. (2020).
Frontiers in Microbiology, 11, 584222. https://doi.org/10.3389/fmicb.2020.584222
2020
Functional Seasonality of Free-Living and Particle-Associated Prokaryotic Communities in the Coastal Adriatic Sea
Steiner, P. A., Geijo, J., Fadeev, E., Obiol, A., Sintes, E., Rattei, T., & Herndl, G. J. (2020).
Frontiers in Microbiology, 11, 584222. https://doi.org/10.3389/fmicb.2020.584222
2018
Microbial Communities in the East and West Fram Strait During Sea Ice Melting Season
Fadeev, E., Salter, I., Schourup-Kristensen, V., Nöthig, E.-M., Metfies, K., Engel, A., Piontek, J., Boetius, A., & Bienhold, C. (2018).
Frontiers in Marine Science, 5, 429. https://doi.org/10.3389/fmars.2018.00429
Marine microbes in 4D-using time series observation to assess the dynamics of the ocean microbiome and its links to ocean health
Buttigieg, P. L., Fadeev, E., Bienhold, C., Hehemann, L., Offre, P., & Boetius, A. (2018).
Current Opinion in Microbiology, 43, 169–185. https://doi.org/10.1016/j.mib.2018.01.015
2016
How Clonal Is Clonal? Genome Plasticity across Multicellular Segments of a “Candidatus Marithrix sp.” Filament from Sulfidic, Briny Seafloor Sediments in the Gulf of Mexico
Salman-Carvalho, V., Fadeev, E., Joye, S. B., & Teske, A. (2016).
Frontiers in Microbiology, 7, 1173. https://doi.org/10.3389/fmicb.2016.01173
Why Close a Bacterial Genome? The Plasmid of Alteromonas Macleodii HOT1A3 is a Vector for Inter-Specific Transfer of a Flexible Genomic Island
Fadeev, E., De Pascale, F., Vezzi, A., Hübner, S., Aharonovich, D., & Sher, D. (2016).
Frontiers in Microbiology, 7, 248. https://doi.org/10.3389/fmicb.2016.00248